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matlab-based physio toolbox  (MathWorks Inc)


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    Structured Review

    MathWorks Inc matlab-based physio toolbox
    Software pipeline of integration of the <t>PhysIO</t> toolbox into CBRAIN and high-performance computing clusters.
    Matlab Based Physio Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/matlab-based physio toolbox/product/MathWorks Inc
    Average 90 stars, based on 1 article reviews
    matlab-based physio toolbox - by Bioz Stars, 2026-03
    90/100 stars

    Images

    1) Product Images from "Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN"

    Article Title: Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN

    Journal: Frontiers in Neuroinformatics

    doi: 10.3389/fninf.2023.1251023

    Software pipeline of integration of the PhysIO toolbox into CBRAIN and high-performance computing clusters.
    Figure Legend Snippet: Software pipeline of integration of the PhysIO toolbox into CBRAIN and high-performance computing clusters.

    Techniques Used: Software

    Outputs of PhysIO on CBRAIN (Variance reduced map; pct_var_reduced.nii.gz) using various noise modeling algorithms available in PhysIO: (A) RETROICOR (B) RVT along with HRV , (C) RVT alone (D) HRV alone. The variance maps were visualized using CBRAIN’s browser-based visualization module. The data used to produce the images are available on OpenNeuro.org . As the voxels indicate percentage of total variance, the lower threshold in all images is zero; the upper thresholds are 86.6% (0.866) for (A) , 19.2% (0.192) for (B) , 17.8% for (C) , and 18.1% for (D) . The images have a lower-bound cutoff of 0.1 for (A) and 0.01 for (B–D) .
    Figure Legend Snippet: Outputs of PhysIO on CBRAIN (Variance reduced map; pct_var_reduced.nii.gz) using various noise modeling algorithms available in PhysIO: (A) RETROICOR (B) RVT along with HRV , (C) RVT alone (D) HRV alone. The variance maps were visualized using CBRAIN’s browser-based visualization module. The data used to produce the images are available on OpenNeuro.org . As the voxels indicate percentage of total variance, the lower threshold in all images is zero; the upper thresholds are 86.6% (0.866) for (A) , 19.2% (0.192) for (B) , 17.8% for (C) , and 18.1% for (D) . The images have a lower-bound cutoff of 0.1 for (A) and 0.01 for (B–D) .

    Techniques Used:

    Benchmarking and feature comparison for 62 fMRI runs processed by PhysIO on CBRAIN and with a local MATLAB installation.
    Figure Legend Snippet: Benchmarking and feature comparison for 62 fMRI runs processed by PhysIO on CBRAIN and with a local MATLAB installation.

    Techniques Used: Comparison, Software

    Input and output data representation in CBRAIN. (A) CBRAIN File Browser interface with data stored in BIDS Subject folders. (B) CBRAIN File Viewer window showing the contents of a PhysIO output folder.
    Figure Legend Snippet: Input and output data representation in CBRAIN. (A) CBRAIN File Browser interface with data stored in BIDS Subject folders. (B) CBRAIN File Viewer window showing the contents of a PhysIO output folder.

    Techniques Used:



    Similar Products

    matlab-based physio toolbox  (MathWorks Inc)
    90
    MathWorks Inc matlab-based physio toolbox
    Software pipeline of integration of the <t>PhysIO</t> toolbox into CBRAIN and high-performance computing clusters.
    Matlab Based Physio Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/matlab-based physio toolbox/product/MathWorks Inc
    Average 90 stars, based on 1 article reviews
    matlab-based physio toolbox - by Bioz Stars, 2026-03
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Software pipeline of integration of the PhysIO toolbox into CBRAIN and high-performance computing clusters.

    Journal: Frontiers in Neuroinformatics

    Article Title: Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN

    doi: 10.3389/fninf.2023.1251023

    Figure Lengend Snippet: Software pipeline of integration of the PhysIO toolbox into CBRAIN and high-performance computing clusters.

    Article Snippet: Excellent open-source tools exist for efficiently computing these models, such as the MATLAB-based PhysIO toolbox , which has been developed to generate various noise models.

    Techniques: Software

    Outputs of PhysIO on CBRAIN (Variance reduced map; pct_var_reduced.nii.gz) using various noise modeling algorithms available in PhysIO: (A) RETROICOR (B) RVT along with HRV , (C) RVT alone (D) HRV alone. The variance maps were visualized using CBRAIN’s browser-based visualization module. The data used to produce the images are available on OpenNeuro.org . As the voxels indicate percentage of total variance, the lower threshold in all images is zero; the upper thresholds are 86.6% (0.866) for (A) , 19.2% (0.192) for (B) , 17.8% for (C) , and 18.1% for (D) . The images have a lower-bound cutoff of 0.1 for (A) and 0.01 for (B–D) .

    Journal: Frontiers in Neuroinformatics

    Article Title: Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN

    doi: 10.3389/fninf.2023.1251023

    Figure Lengend Snippet: Outputs of PhysIO on CBRAIN (Variance reduced map; pct_var_reduced.nii.gz) using various noise modeling algorithms available in PhysIO: (A) RETROICOR (B) RVT along with HRV , (C) RVT alone (D) HRV alone. The variance maps were visualized using CBRAIN’s browser-based visualization module. The data used to produce the images are available on OpenNeuro.org . As the voxels indicate percentage of total variance, the lower threshold in all images is zero; the upper thresholds are 86.6% (0.866) for (A) , 19.2% (0.192) for (B) , 17.8% for (C) , and 18.1% for (D) . The images have a lower-bound cutoff of 0.1 for (A) and 0.01 for (B–D) .

    Article Snippet: Excellent open-source tools exist for efficiently computing these models, such as the MATLAB-based PhysIO toolbox , which has been developed to generate various noise models.

    Techniques:

    Benchmarking and feature comparison for 62 fMRI runs processed by PhysIO on CBRAIN and with a local MATLAB installation.

    Journal: Frontiers in Neuroinformatics

    Article Title: Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN

    doi: 10.3389/fninf.2023.1251023

    Figure Lengend Snippet: Benchmarking and feature comparison for 62 fMRI runs processed by PhysIO on CBRAIN and with a local MATLAB installation.

    Article Snippet: Excellent open-source tools exist for efficiently computing these models, such as the MATLAB-based PhysIO toolbox , which has been developed to generate various noise models.

    Techniques: Comparison, Software

    Input and output data representation in CBRAIN. (A) CBRAIN File Browser interface with data stored in BIDS Subject folders. (B) CBRAIN File Viewer window showing the contents of a PhysIO output folder.

    Journal: Frontiers in Neuroinformatics

    Article Title: Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN

    doi: 10.3389/fninf.2023.1251023

    Figure Lengend Snippet: Input and output data representation in CBRAIN. (A) CBRAIN File Browser interface with data stored in BIDS Subject folders. (B) CBRAIN File Viewer window showing the contents of a PhysIO output folder.

    Article Snippet: Excellent open-source tools exist for efficiently computing these models, such as the MATLAB-based PhysIO toolbox , which has been developed to generate various noise models.

    Techniques: